Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
RTL9Q8NET4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 UQCRFS1P1-201ENST00000435169 820 ntBASIC26.5■■□□□ 1.83
RTL9Q8NET4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.5■■□□□ 1.83
RTL9Q8NET4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTL9Q8NET4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTL9Q8NET4 GUSBP6-202ENST00000438529 1198 ntBASIC26.49■■□□□ 1.83
RTL9Q8NET4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.49■■□□□ 1.83
RTL9Q8NET4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 AC007322.1-201ENST00000426983 750 ntBASIC26.48■■□□□ 1.83
RTL9Q8NET4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 AC010536.3-201ENST00000620306 533 ntBASIC26.48■■□□□ 1.83
RTL9Q8NET4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC26.48■■□□□ 1.83
RTL9Q8NET4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTL9Q8NET4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTL9Q8NET4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC26.47■■□□□ 1.83
RTL9Q8NET4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
RTL9Q8NET4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC26.47■■□□□ 1.83
RTL9Q8NET4 SLC7A5P2-201ENST00000553010 536 ntBASIC26.47■■□□□ 1.83
RTL9Q8NET4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
RTL9Q8NET4 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTL9Q8NET4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTL9Q8NET4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTL9Q8NET4 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
RTL9Q8NET4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTL9Q8NET4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 AC005181.1-201ENST00000604782 1256 ntBASIC26.46■■□□□ 1.83
RTL9Q8NET4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 CD99P1-205ENST00000527459 561 ntBASIC26.46■■□□□ 1.83
RTL9Q8NET4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTL9Q8NET4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC26.46■■□□□ 1.83
RTL9Q8NET4 TMEM191A-211ENST00000637163 1067 ntBASIC26.46■■□□□ 1.83
RTL9Q8NET4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTL9Q8NET4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTL9Q8NET4 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTL9Q8NET4 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL9Q8NET4 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.45■■□□□ 1.82
RTL9Q8NET4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 AL121832.2-201ENST00000610979 668 ntBASIC26.45■■□□□ 1.82
RTL9Q8NET4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTL9Q8NET4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL9Q8NET4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL9Q8NET4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL9Q8NET4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
RTL9Q8NET4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 TSPY6P-201ENST00000448518 926 ntBASIC26.44■■□□□ 1.82
RTL9Q8NET4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
RTL9Q8NET4 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.44■■□□□ 1.82
RTL9Q8NET4 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms