Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 AP005212.1-201ENST00000581547 1997 ntBASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.78■□□□□ 0.6
LYSMD2Q8IV50 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 AL592293.1-201ENST00000502889 1188 ntBASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 AC011551.1-201ENST00000614101 683 ntBASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LYSMD2Q8IV50 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD2Q8IV50 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD2Q8IV50 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD2Q8IV50 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD2Q8IV50 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LYSMD2Q8IV50 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 AC018445.3-201ENST00000624177 1945 ntBASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LYSMD2Q8IV50 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LYSMD2Q8IV50 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 MIR6765-201ENST00000614092 87 ntBASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 SMG8-203ENST00000578922 2178 ntBASIC18.74■□□□□ 0.59
LYSMD2Q8IV50 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 LINC01960-201ENST00000563759 1884 ntBASIC18.73■□□□□ 0.59
LYSMD2Q8IV50 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms