Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF546Q86UE3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF546Q86UE3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 AC087289.5-201ENST00000586076 3175 ntBASIC17.74■□□□□ 0.43
ZNF546Q86UE3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 AC087393.1-201ENST00000582896 145 ntBASIC17.74■□□□□ 0.43
ZNF546Q86UE3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.74■□□□□ 0.43
ZNF546Q86UE3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF546Q86UE3 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 AL020996.1-203ENST00000536896 2307 ntBASIC17.73■□□□□ 0.43
ZNF546Q86UE3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
ZNF546Q86UE3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.72■□□□□ 0.43
ZNF546Q86UE3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.71■□□□□ 0.43
ZNF546Q86UE3 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF546Q86UE3 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
ZNF546Q86UE3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
ZNF546Q86UE3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms