Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
LCA10Q71F78 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 AC007029.1-201ENST00000604183 313 ntBASIC11.47□□□□□ -0.57
LCA10Q71F78 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LCA10Q71F78 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
LCA10Q71F78 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
LCA10Q71F78 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
LCA10Q71F78 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC11.46□□□□□ -0.57
LCA10Q71F78 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC11.46□□□□□ -0.57
LCA10Q71F78 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
LCA10Q71F78 MIR639-201ENST00000384974 98 ntBASIC11.46□□□□□ -0.57
LCA10Q71F78 KRT18P10-201ENST00000388836 1287 ntBASIC11.46□□□□□ -0.57
LCA10Q71F78 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC11.46□□□□□ -0.57
LCA10Q71F78 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC11.46□□□□□ -0.57
LCA10Q71F78 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
LCA10Q71F78 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.46□□□□□ -0.58
LCA10Q71F78 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
LCA10Q71F78 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LCA10Q71F78 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LCA10Q71F78 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
LCA10Q71F78 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
LCA10Q71F78 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
LCA10Q71F78 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC11.45□□□□□ -0.58
LCA10Q71F78 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
LCA10Q71F78 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
LCA10Q71F78 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 SRP68-213ENST00000629930 165 ntTSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.45□□□□□ -0.58
LCA10Q71F78 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
LCA10Q71F78 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
LCA10Q71F78 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
LCA10Q71F78 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
LCA10Q71F78 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LCA10Q71F78 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LCA10Q71F78 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LCA10Q71F78 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LCA10Q71F78 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
LCA10Q71F78 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
LCA10Q71F78 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 PVT1-219ENST00000523427 938 ntTSL 3 BASIC11.44□□□□□ -0.58
LCA10Q71F78 RPS2-202ENST00000526522 924 ntTSL 2 BASIC11.44□□□□□ -0.58
LCA10Q71F78 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LCA10Q71F78 AR-207ENST00000612010 3896 ntTSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms