Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
CCDC141Q6ZP82 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 BET1L-204ENST00000410108 637 ntTSL 3 BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
CCDC141Q6ZP82 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 PHB2-213ENST00000546111 858 ntTSL 2 BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 BMP1-204ENST00000397814 836 ntTSL 4 BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
CCDC141Q6ZP82 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 TBCB-214ENST00000629269 413 ntTSL 5 BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 MKRN4P-201ENST00000444706 1521 ntBASIC32.28■■■□□ 2.76
CCDC141Q6ZP82 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 AC093787.1-201ENST00000450396 207 ntBASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
CCDC141Q6ZP82 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC32.26■■■□□ 2.76
CCDC141Q6ZP82 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 OR10C1-204ENST00000622521 1039 ntBASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC32.26■■■□□ 2.75
CCDC141Q6ZP82 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 MIPEPP3-201ENST00000412105 444 ntBASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 AC016405.3-201ENST00000607710 860 ntBASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 AC092118.2-201ENST00000613495 667 ntBASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
CCDC141Q6ZP82 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
CCDC141Q6ZP82 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 PPP1R14BP2-201ENST00000426284 444 ntBASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 MIR4758-201ENST00000577688 71 ntBASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 FGF8-207ENST00000618991 856 ntTSL 3 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 AC137767.1-201ENST00000602918 1920 ntBASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC32.23■■■□□ 2.75
CCDC141Q6ZP82 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
CCDC141Q6ZP82 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
CCDC141Q6ZP82 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC32.22■■■□□ 2.75
CCDC141Q6ZP82 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 AC087742.1-201ENST00000575880 1738 ntBASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 AC083880.1-201ENST00000608266 535 ntBASIC32.21■■■□□ 2.75
CCDC141Q6ZP82 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC32.21■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms