Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDCD4Q53EL6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.52■□□□□ 0.88
PDCD4Q53EL6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PDCD4Q53EL6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.52■□□□□ 0.87
PDCD4Q53EL6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
PDCD4Q53EL6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.52■□□□□ 0.87
PDCD4Q53EL6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 OR2I1P-207ENST00000453522 948 ntBASIC20.51■□□□□ 0.87
PDCD4Q53EL6 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 AC099791.2-201ENST00000605725 427 ntBASIC20.51■□□□□ 0.87
PDCD4Q53EL6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PDCD4Q53EL6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 AC087239.1-201ENST00000622671 572 ntBASIC20.5■□□□□ 0.87
PDCD4Q53EL6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PDCD4Q53EL6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.49■□□□□ 0.87
PDCD4Q53EL6 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 MIR3181-201ENST00000578512 73 ntBASIC20.48■□□□□ 0.87
PDCD4Q53EL6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PDCD4Q53EL6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms