Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SYCNQ0VAF6 FAM99A-202ENST00000538190 1989 ntBASIC14.13□□□□□ -0.15
SYCNQ0VAF6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 UNC93B3-201ENST00000308076 687 ntBASIC14.12□□□□□ -0.15
SYCNQ0VAF6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 SLC47A1P1-202ENST00000449666 945 ntBASIC14.12□□□□□ -0.15
SYCNQ0VAF6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SYCNQ0VAF6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SYCNQ0VAF6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 AL034346.1-201ENST00000568244 1277 ntBASIC14.1□□□□□ -0.15
SYCNQ0VAF6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 AL136162.1-201ENST00000607711 1078 ntBASIC14.1□□□□□ -0.15
SYCNQ0VAF6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SYCNQ0VAF6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 BX842568.3-201ENST00000418104 571 ntBASIC14.09□□□□□ -0.15
SYCNQ0VAF6 MIR4767-201ENST00000582827 78 ntBASIC14.09□□□□□ -0.15
SYCNQ0VAF6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SYCNQ0VAF6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms