Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB5BP61020 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RAB5BP61020 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RAB5BP61020 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC16.81■□□□□ 0.28
RAB5BP61020 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC16.81■□□□□ 0.28
RAB5BP61020 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB5BP61020 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB5BP61020 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB5BP61020 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB5BP61020 AC005082.1-201ENST00000413042 2259 ntBASIC16.8■□□□□ 0.28
RAB5BP61020 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB5BP61020 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAB5BP61020 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAB5BP61020 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB5BP61020 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 RARRES2P7-201ENST00000567349 469 ntBASIC16.8■□□□□ 0.28
RAB5BP61020 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.8■□□□□ 0.28
RAB5BP61020 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.8■□□□□ 0.28
RAB5BP61020 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAB5BP61020 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.8■□□□□ 0.28
RAB5BP61020 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
RAB5BP61020 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAB5BP61020 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.79■□□□□ 0.28
RAB5BP61020 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB5BP61020 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.79■□□□□ 0.28
RAB5BP61020 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
RAB5BP61020 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB5BP61020 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC16.78■□□□□ 0.28
RAB5BP61020 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
RAB5BP61020 SETD8P1-201ENST00000623146 1180 ntBASIC16.78■□□□□ 0.28
RAB5BP61020 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.78■□□□□ 0.28
RAB5BP61020 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
RAB5BP61020 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
RAB5BP61020 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC16.77■□□□□ 0.28
RAB5BP61020 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
RAB5BP61020 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
RAB5BP61020 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
RAB5BP61020 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 Z98882.1-201ENST00000622160 2253 ntBASIC16.77■□□□□ 0.27
RAB5BP61020 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
RAB5BP61020 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RAB5BP61020 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB5BP61020 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.76■□□□□ 0.27
RAB5BP61020 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB5BP61020 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB5BP61020 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB5BP61020 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms