Protein–RNA interactions for Protein: P48547

KCNC1, Potassium voltage-gated channel subfamily C member 1, humanhuman

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC1P48547 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KCNC1P48547 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
KCNC1P48547 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.01■□□□□ 0.95
KCNC1P48547 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KCNC1P48547 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
KCNC1P48547 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KCNC1P48547 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.01■□□□□ 0.95
KCNC1P48547 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.01■□□□□ 0.95
KCNC1P48547 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.01■□□□□ 0.95
KCNC1P48547 FEM1AP4-201ENST00000443167 1987 ntBASIC21.01■□□□□ 0.95
KCNC1P48547 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNC1P48547 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21■□□□□ 0.95
KCNC1P48547 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
KCNC1P48547 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNC1P48547 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
KCNC1P48547 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KCNC1P48547 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.99■□□□□ 0.95
KCNC1P48547 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNC1P48547 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.99■□□□□ 0.95
KCNC1P48547 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
KCNC1P48547 MIR4767-201ENST00000582827 78 ntBASIC20.99■□□□□ 0.95
KCNC1P48547 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNC1P48547 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNC1P48547 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.98■□□□□ 0.95
KCNC1P48547 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNC1P48547 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNC1P48547 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNC1P48547 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
KCNC1P48547 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.98■□□□□ 0.95
KCNC1P48547 AC024257.2-201ENST00000549699 147 ntBASIC20.98■□□□□ 0.95
KCNC1P48547 AC133561.4-201ENST00000566112 224 ntBASIC20.98■□□□□ 0.95
KCNC1P48547 AP004607.7-201ENST00000527152 1677 ntBASIC20.98■□□□□ 0.95
KCNC1P48547 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNC1P48547 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNC1P48547 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNC1P48547 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNC1P48547 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.97■□□□□ 0.95
KCNC1P48547 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
KCNC1P48547 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNC1P48547 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.97■□□□□ 0.95
KCNC1P48547 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.97■□□□□ 0.95
KCNC1P48547 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
KCNC1P48547 AC003102.1-202ENST00000563394 1796 ntBASIC20.97■□□□□ 0.95
KCNC1P48547 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.96■□□□□ 0.95
KCNC1P48547 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
KCNC1P48547 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.96■□□□□ 0.95
KCNC1P48547 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
KCNC1P48547 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNC1P48547 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
KCNC1P48547 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.95■□□□□ 0.94
KCNC1P48547 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.95■□□□□ 0.94
KCNC1P48547 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 BX842568.3-201ENST00000418104 571 ntBASIC20.95■□□□□ 0.94
KCNC1P48547 AL136162.1-201ENST00000607711 1078 ntBASIC20.95■□□□□ 0.94
KCNC1P48547 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.95■□□□□ 0.94
KCNC1P48547 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
KCNC1P48547 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.94■□□□□ 0.94
KCNC1P48547 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNC1P48547 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
KCNC1P48547 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.94■□□□□ 0.94
KCNC1P48547 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms