Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 SCD6YPR129W 1050 nt3.39□□□□□ -1.87
TY1B-JR1P47098 ATG7YHR171W 1893 nt3.39□□□□□ -1.87
TY1B-JR1P47098 PEX6YNL329C 3093 nt3.39□□□□□ -1.87
TY1B-JR1P47098 BCH2YKR027W 2298 nt3.39□□□□□ -1.87
TY1B-JR1P47098 FRE4YNR060W 2160 nt3.39□□□□□ -1.87
TY1B-JR1P47098 MPP10YJR002W 1782 nt3.38□□□□□ -1.87
TY1B-JR1P47098 RAD7YJR052W 1698 nt3.38□□□□□ -1.87
TY1B-JR1P47098 USE1YGL098W 738 nt3.38□□□□□ -1.87
TY1B-JR1P47098 YJR098CYJR098C 1971 nt3.38□□□□□ -1.87
TY1B-JR1P47098 MCD4YKL165C 2760 nt3.38□□□□□ -1.87
TY1B-JR1P47098 YGL188CYGL188C 174 nt3.38□□□□□ -1.87
TY1B-JR1P47098 TAF3YPL011C 1062 nt3.38□□□□□ -1.87
TY1B-JR1P47098 CST9YLR394W 1449 nt3.37□□□□□ -1.87
TY1B-JR1P47098 IRC8YJL051W 2469 nt3.37□□□□□ -1.87
TY1B-JR1P47098 ENT1YDL161W 1365 nt3.37□□□□□ -1.87
TY1B-JR1P47098 DIS3YOL021C 3006 nt3.37□□□□□ -1.87
TY1B-JR1P47098 SSK2YNR031C 4740 nt3.36□□□□□ -1.87
TY1B-JR1P47098 ECO1YFR027W 846 nt3.36□□□□□ -1.87
TY1B-JR1P47098 RPC17YJL011C 486 nt3.36□□□□□ -1.87
TY1B-JR1P47098 NOP13YNL175C 1212 nt3.36□□□□□ -1.87
TY1B-JR1P47098 CIN1YOR349W 3045 nt3.36□□□□□ -1.87
TY1B-JR1P47098 FAR1YJL157C 2493 nt3.36□□□□□ -1.87
TY1B-JR1P47098 GEP4YHR100C 558 nt3.35□□□□□ -1.87
TY1B-JR1P47098 PEX8YGR077C 1770 nt3.35□□□□□ -1.87
TY1B-JR1P47098 VPS13YLL040C 9435 nt3.35□□□□□ -1.87
TY1B-JR1P47098 SPO14YKR031C 5052 nt3.35□□□□□ -1.87
TY1B-JR1P47098 ORM2YLR350W 651 nt3.35□□□□□ -1.87
TY1B-JR1P47098 MET14YKL001C 609 nt3.34□□□□□ -1.87
TY1B-JR1P47098 YAL059C-AYAL059C-A 423 nt3.34□□□□□ -1.87
TY1B-JR1P47098 ATG17YLR423C 1254 nt3.34□□□□□ -1.87
TY1B-JR1P47098 GAB1YLR459W 1185 nt3.34□□□□□ -1.87
TY1B-JR1P47098 SVL3YPL032C 2478 nt3.34□□□□□ -1.88
TY1B-JR1P47098 SIR4YDR227W 4077 nt3.34□□□□□ -1.88
TY1B-JR1P47098 NEO1YIL048W 3456 nt3.33□□□□□ -1.88
TY1B-JR1P47098 REV3YPL167C 4515 nt3.33□□□□□ -1.88
TY1B-JR1P47098 PPT2YPL148C 522 nt3.33□□□□□ -1.88
TY1B-JR1P47098 DUG2YBR281C 2637 nt3.33□□□□□ -1.88
TY1B-JR1P47098 MNR2YKL064W 2910 nt3.33□□□□□ -1.88
TY1B-JR1P47098 TRI1YMR233W 681 nt3.33□□□□□ -1.88
TY1B-JR1P47098 SPO73YER046W 432 nt3.32□□□□□ -1.88
TY1B-JR1P47098 RPL27AYHR010W 411 nt3.32□□□□□ -1.88
TY1B-JR1P47098 NUP159YIL115C 4383 nt3.32□□□□□ -1.88
TY1B-JR1P47098 DEF1YKL054C 2217 nt3.32□□□□□ -1.88
TY1B-JR1P47098 SRP68YPL243W 1800 nt3.32□□□□□ -1.88
TY1B-JR1P47098 BNR1YIL159W 4128 nt3.32□□□□□ -1.88
TY1B-JR1P47098 HSH155YMR288W 2916 nt3.32□□□□□ -1.88
TY1B-JR1P47098 DCP2YNL118C 2913 nt3.31□□□□□ -1.88
TY1B-JR1P47098 ERG25YGR060W 930 nt3.31□□□□□ -1.88
TY1B-JR1P47098 YLR125WYLR125W 411 nt3.31□□□□□ -1.88
TY1B-JR1P47098 RRP5YMR229C 5190 nt3.31□□□□□ -1.88
TY1B-JR1P47098 SFB2YNL049C 2631 nt3.31□□□□□ -1.88
TY1B-JR1P47098 SIP3YNL257C 3690 nt3.3□□□□□ -1.88
TY1B-JR1P47098 YER039C-AYER039C-A 219 nt3.3□□□□□ -1.88
TY1B-JR1P47098 TAF4YMR005W 1167 nt3.3□□□□□ -1.88
TY1B-JR1P47098 MSS18YPR134W 807 nt3.3□□□□□ -1.88
TY1B-JR1P47098 DOA4YDR069C 2781 nt3.3□□□□□ -1.88
TY1B-JR1P47098 CDH1YGL003C 1701 nt3.3□□□□□ -1.88
TY1B-JR1P47098 SEG1YMR086W 2883 nt3.3□□□□□ -1.88
TY1B-JR1P47098 YIL092WYIL092W 1902 nt3.3□□□□□ -1.88
TY1B-JR1P47098 TFC3YAL001C 3483 nt3.3□□□□□ -1.88
TY1B-JR1P47098 SLM2YNL047C 1971 nt3.3□□□□□ -1.88
TY1B-JR1P47098 HPR1YDR138W 2259 nt3.29□□□□□ -1.88
TY1B-JR1P47098 YOL098CYOL098C 3114 nt3.29□□□□□ -1.88
TY1B-JR1P47098 BET1YIL004C 429 nt3.29□□□□□ -1.88
TY1B-JR1P47098 TMC1YOR052C 453 nt3.29□□□□□ -1.88
TY1B-JR1P47098 RAS1YOR101W 930 nt3.29□□□□□ -1.88
TY1B-JR1P47098 SSN2YDR443C 4263 nt3.29□□□□□ -1.88
TY1B-JR1P47098 KRE33YNL132W 3171 nt3.29□□□□□ -1.88
TY1B-JR1P47098 PUF6YDR496C 1971 nt3.28□□□□□ -1.88
TY1B-JR1P47098 VAC14YLR386W 2643 nt3.28□□□□□ -1.88
TY1B-JR1P47098 YER079C-AYER079C-A 339 nt3.28□□□□□ -1.88
TY1B-JR1P47098 SAS5YOR213C 747 nt3.28□□□□□ -1.88
TY1B-JR1P47098 REB1YBR049C 2433 nt3.28□□□□□ -1.88
TY1B-JR1P47098 ROM1YGR070W 3468 nt3.28□□□□□ -1.89
TY1B-JR1P47098 YDR535CYDR535C 501 nt3.28□□□□□ -1.89
TY1B-JR1P47098 RPS23AYGR118W 438 nt3.28□□□□□ -1.89
TY1B-JR1P47098 RPS23BYPR132W 438 nt3.28□□□□□ -1.89
TY1B-JR1P47098 ESL1YIL151C 3357 nt3.28□□□□□ -1.89
TY1B-JR1P47098 TAE2YPL009C 3117 nt3.27□□□□□ -1.89
TY1B-JR1P47098 SSF2YDR312W 1362 nt3.27□□□□□ -1.89
TY1B-JR1P47098 SYS1YJL004C 612 nt3.27□□□□□ -1.89
TY1B-JR1P47098 YBL065WYBL065W 345 nt3.27□□□□□ -1.89
TY1B-JR1P47098 SPF1YEL031W 3648 nt3.26□□□□□ -1.89
TY1B-JR1P47098 YLR122CYLR122C 378 nt3.26□□□□□ -1.89
TY1B-JR1P47098 UNG1YML021C 1080 nt3.26□□□□□ -1.89
TY1B-JR1P47098 MF(ALPHA)1YPL187W 498 nt3.26□□□□□ -1.89
TY1B-JR1P47098 PIP2YOR363C 2991 nt3.26□□□□□ -1.89
TY1B-JR1P47098 PBA1YLR199C 831 nt3.25□□□□□ -1.89
TY1B-JR1P47098 YBL005W-AYBL005W-A 1323 nt3.25□□□□□ -1.89
TY1B-JR1P47098 YMR046CYMR046C 1323 nt3.25□□□□□ -1.89
TY1B-JR1P47098 YLR302CYLR302C 363 nt3.25□□□□□ -1.89
TY1B-JR1P47098 POL30YBR088C 777 nt3.25□□□□□ -1.89
TY1B-JR1P47098 TAF12YDR145W 1620 nt3.25□□□□□ -1.89
TY1B-JR1P47098 BUD4YJR092W 4344 nt3.25□□□□□ -1.89
TY1B-JR1P47098 MSH4YFL003C 2637 nt3.24□□□□□ -1.89
TY1B-JR1P47098 OPT2YPR194C 2634 nt3.24□□□□□ -1.89
TY1B-JR1P47098 FLO1YAR050W 4614 nt3.24□□□□□ -1.89
TY1B-JR1P47098 ECM1YAL059W 639 nt3.24□□□□□ -1.89
TY1B-JR1P47098 snR17asnR17a 333 nt3.24□□□□□ -1.89
TY1B-JR1P47098 PST1YDR055W 1335 nt3.23□□□□□ -1.89
Retrieved 100 of 7,029 protein–RNA pairs in 18.1 ms