Protein–RNA interactions for Protein: P35408

PTGER4, Prostaglandin E2 receptor EP4 subtype, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER4P35408 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.34■□□□□ 0.69
PTGER4P35408 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.34■□□□□ 0.69
PTGER4P35408 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PTGER4P35408 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTGER4P35408 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTGER4P35408 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PTGER4P35408 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PTGER4P35408 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PTGER4P35408 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.33■□□□□ 0.68
PTGER4P35408 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.33■□□□□ 0.68
PTGER4P35408 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.33■□□□□ 0.68
PTGER4P35408 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTGER4P35408 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.33■□□□□ 0.68
PTGER4P35408 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.33■□□□□ 0.68
PTGER4P35408 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTGER4P35408 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PTGER4P35408 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
PTGER4P35408 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.33■□□□□ 0.68
PTGER4P35408 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
PTGER4P35408 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
PTGER4P35408 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 AC079089.2-201ENST00000531211 1277 ntBASIC19.32■□□□□ 0.68
PTGER4P35408 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.32■□□□□ 0.68
PTGER4P35408 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
PTGER4P35408 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.32■□□□□ 0.68
PTGER4P35408 AC005224.4-201ENST00000583262 1652 ntBASIC19.32■□□□□ 0.68
PTGER4P35408 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PTGER4P35408 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
PTGER4P35408 LINC01960-201ENST00000563759 1884 ntBASIC19.31■□□□□ 0.68
PTGER4P35408 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.31■□□□□ 0.68
PTGER4P35408 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.31■□□□□ 0.68
PTGER4P35408 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PTGER4P35408 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTGER4P35408 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PTGER4P35408 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
PTGER4P35408 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.3■□□□□ 0.68
PTGER4P35408 MIR663A-201ENST00000385250 93 ntBASIC19.3■□□□□ 0.68
PTGER4P35408 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PTGER4P35408 TSPY20P-201ENST00000450910 630 ntBASIC19.3■□□□□ 0.68
PTGER4P35408 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.3■□□□□ 0.68
PTGER4P35408 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.3■□□□□ 0.68
PTGER4P35408 AC142086.2-201ENST00000569753 217 ntBASIC19.3■□□□□ 0.68
PTGER4P35408 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PTGER4P35408 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PTGER4P35408 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PTGER4P35408 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.29■□□□□ 0.68
PTGER4P35408 KRT87P-202ENST00000534226 1464 ntBASIC19.29■□□□□ 0.68
PTGER4P35408 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.29■□□□□ 0.68
PTGER4P35408 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.29■□□□□ 0.68
PTGER4P35408 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.29■□□□□ 0.68
PTGER4P35408 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.29■□□□□ 0.68
PTGER4P35408 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.29■□□□□ 0.68
PTGER4P35408 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.29■□□□□ 0.68
PTGER4P35408 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.29■□□□□ 0.68
PTGER4P35408 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PTGER4P35408 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PTGER4P35408 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTGER4P35408 AL034346.1-201ENST00000568244 1277 ntBASIC19.28■□□□□ 0.68
PTGER4P35408 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.28■□□□□ 0.68
PTGER4P35408 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.28■□□□□ 0.68
PTGER4P35408 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTGER4P35408 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PTGER4P35408 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PTGER4P35408 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms