Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ABCD3P28288 AP006587.3-201ENST00000525742 1516 ntBASIC19.75■□□□□ 0.75
ABCD3P28288 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ABCD3P28288 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCD3P28288 EP400NL-214ENST00000641289 2402 ntBASIC19.74■□□□□ 0.75
ABCD3P28288 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 AC055733.4-201ENST00000638462 1354 ntBASIC19.74■□□□□ 0.75
ABCD3P28288 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCD3P28288 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.74■□□□□ 0.75
ABCD3P28288 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ABCD3P28288 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.74■□□□□ 0.75
ABCD3P28288 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.74■□□□□ 0.75
ABCD3P28288 FAM99A-202ENST00000538190 1989 ntBASIC19.74■□□□□ 0.75
ABCD3P28288 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ABCD3P28288 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ABCD3P28288 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
ABCD3P28288 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCD3P28288 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
ABCD3P28288 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCD3P28288 KRT18P14-201ENST00000534205 1250 ntBASIC19.73■□□□□ 0.75
ABCD3P28288 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
ABCD3P28288 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.73■□□□□ 0.75
ABCD3P28288 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ABCD3P28288 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.73■□□□□ 0.75
ABCD3P28288 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ABCD3P28288 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ABCD3P28288 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
ABCD3P28288 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ABCD3P28288 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ABCD3P28288 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.72■□□□□ 0.75
ABCD3P28288 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.72■□□□□ 0.75
ABCD3P28288 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ABCD3P28288 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ABCD3P28288 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ABCD3P28288 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ABCD3P28288 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.71■□□□□ 0.75
ABCD3P28288 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L2-201ENST00000561772 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.71■□□□□ 0.75
ABCD3P28288 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.71■□□□□ 0.75
ABCD3P28288 MIR5787-201ENST00000611784 55 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L6-201ENST00000626483 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L1-201ENST00000627662 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L8-201ENST00000629013 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L3-201ENST00000630187 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L7-201ENST00000630678 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 DUX4L5-201ENST00000630834 1275 ntBASIC19.71■□□□□ 0.75
ABCD3P28288 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ABCD3P28288 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.71■□□□□ 0.75
ABCD3P28288 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ABCD3P28288 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 C11orf96-202ENST00000528572 1834 ntBASIC19.7■□□□□ 0.74
ABCD3P28288 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.7■□□□□ 0.74
ABCD3P28288 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.7■□□□□ 0.74
ABCD3P28288 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.7■□□□□ 0.74
ABCD3P28288 AC034268.1-201ENST00000441047 882 ntBASIC19.7■□□□□ 0.74
ABCD3P28288 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.7■□□□□ 0.74
ABCD3P28288 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.7■□□□□ 0.74
ABCD3P28288 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ABCD3P28288 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.7■□□□□ 0.74
ABCD3P28288 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ABCD3P28288 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms