Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LBPP18428 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LBPP18428 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LBPP18428 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LBPP18428 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LBPP18428 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LBPP18428 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.64■□□□□ 0.89
LBPP18428 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.64■□□□□ 0.89
LBPP18428 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LBPP18428 AC087239.1-201ENST00000622671 572 ntBASIC20.64■□□□□ 0.89
LBPP18428 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
LBPP18428 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LBPP18428 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.64■□□□□ 0.89
LBPP18428 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LBPP18428 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.63■□□□□ 0.89
LBPP18428 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
LBPP18428 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.63■□□□□ 0.89
LBPP18428 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LBPP18428 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.63■□□□□ 0.89
LBPP18428 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LBPP18428 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LBPP18428 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.63■□□□□ 0.89
LBPP18428 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LBPP18428 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LBPP18428 KRT16P3-201ENST00000439127 1283 ntBASIC20.63■□□□□ 0.89
LBPP18428 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.63■□□□□ 0.89
LBPP18428 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.63■□□□□ 0.89
LBPP18428 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.62■□□□□ 0.89
LBPP18428 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.62■□□□□ 0.89
LBPP18428 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LBPP18428 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.62■□□□□ 0.89
LBPP18428 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.62■□□□□ 0.89
LBPP18428 OR2I1P-207ENST00000453522 948 ntBASIC20.62■□□□□ 0.89
LBPP18428 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LBPP18428 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LBPP18428 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LBPP18428 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LBPP18428 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LBPP18428 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.62■□□□□ 0.89
LBPP18428 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LBPP18428 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 MIR3181-201ENST00000578512 73 ntBASIC20.61■□□□□ 0.89
LBPP18428 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.61■□□□□ 0.89
LBPP18428 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
LBPP18428 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.61■□□□□ 0.89
LBPP18428 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LBPP18428 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.6■□□□□ 0.89
LBPP18428 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 AL356740.2-201ENST00000601559 647 ntBASIC20.6■□□□□ 0.89
LBPP18428 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LBPP18428 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.6■□□□□ 0.89
LBPP18428 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
LBPP18428 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LBPP18428 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.6■□□□□ 0.89
LBPP18428 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LBPP18428 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LBPP18428 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
LBPP18428 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 AC010141.3-201ENST00000456659 717 ntBASIC20.59■□□□□ 0.89
LBPP18428 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.59■□□□□ 0.89
LBPP18428 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LBPP18428 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBPP18428 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.58■□□□□ 0.89
LBPP18428 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
LBPP18428 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBPP18428 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.58■□□□□ 0.89
LBPP18428 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBPP18428 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBPP18428 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LBPP18428 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LBPP18428 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.58■□□□□ 0.89
LBPP18428 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LBPP18428 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
LBPP18428 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms