Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
VSIG8P0DPA2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
VSIG8P0DPA2 AL157384.1-201ENST00000445995 2473 ntBASIC18.29■□□□□ 0.52
VSIG8P0DPA2 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.29■□□□□ 0.52
VSIG8P0DPA2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 UNC93B8-201ENST00000511903 705 ntBASIC18.28■□□□□ 0.52
VSIG8P0DPA2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
VSIG8P0DPA2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 AC068587.7-201ENST00000641602 218 ntBASIC18.27■□□□□ 0.52
VSIG8P0DPA2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VSIG8P0DPA2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSIG8P0DPA2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSIG8P0DPA2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSIG8P0DPA2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VSIG8P0DPA2 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VSIG8P0DPA2 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 GUSBP5-201ENST00000418136 578 ntBASIC18.25■□□□□ 0.51
VSIG8P0DPA2 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 AC099791.2-201ENST00000605725 427 ntBASIC18.25■□□□□ 0.51
VSIG8P0DPA2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VSIG8P0DPA2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VSIG8P0DPA2 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms