Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SP9P0CG40 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.4■■□□□ 1.02
SP9P0CG40 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SP9P0CG40 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.4■■□□□ 1.02
SP9P0CG40 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SP9P0CG40 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SP9P0CG40 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.4■■□□□ 1.02
SP9P0CG40 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.4■■□□□ 1.02
SP9P0CG40 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.4■■□□□ 1.02
SP9P0CG40 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.4■■□□□ 1.02
SP9P0CG40 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.4■■□□□ 1.02
SP9P0CG40 REXO1L12P-201ENST00000622156 912 ntBASIC21.4■■□□□ 1.02
SP9P0CG40 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.4■■□□□ 1.02
SP9P0CG40 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SP9P0CG40 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SP9P0CG40 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SP9P0CG40 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SP9P0CG40 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SP9P0CG40 LINC00543-201ENST00000567234 1845 ntBASIC21.39■■□□□ 1.02
SP9P0CG40 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.39■■□□□ 1.01
SP9P0CG40 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 SERPINH1P1-201ENST00000419794 1249 ntBASIC21.39■■□□□ 1.01
SP9P0CG40 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
SP9P0CG40 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.39■■□□□ 1.01
SP9P0CG40 AC053503.5-201ENST00000601508 636 ntBASIC21.39■■□□□ 1.01
SP9P0CG40 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.39■■□□□ 1.01
SP9P0CG40 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SP9P0CG40 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SP9P0CG40 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.39■■□□□ 1.01
SP9P0CG40 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.38■■□□□ 1.01
SP9P0CG40 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC21.38■■□□□ 1.01
SP9P0CG40 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SP9P0CG40 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.38■■□□□ 1.01
SP9P0CG40 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
SP9P0CG40 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.38■■□□□ 1.01
SP9P0CG40 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.38■■□□□ 1.01
SP9P0CG40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.38■■□□□ 1.01
SP9P0CG40 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
SP9P0CG40 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SP9P0CG40 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SP9P0CG40 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SP9P0CG40 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SP9P0CG40 AP004607.7-201ENST00000527152 1677 ntBASIC21.37■■□□□ 1.01
SP9P0CG40 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SP9P0CG40 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SP9P0CG40 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SP9P0CG40 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SP9P0CG40 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.37■■□□□ 1.01
SP9P0CG40 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.37■■□□□ 1.01
SP9P0CG40 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.37■■□□□ 1.01
SP9P0CG40 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SP9P0CG40 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SP9P0CG40 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.37■■□□□ 1.01
SP9P0CG40 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SP9P0CG40 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SP9P0CG40 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.36■■□□□ 1.01
SP9P0CG40 FAM197Y4-202ENST00000622692 608 ntBASIC21.36■■□□□ 1.01
SP9P0CG40 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SP9P0CG40 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.35■■□□□ 1.01
SP9P0CG40 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SP9P0CG40 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
SP9P0CG40 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.35■■□□□ 1.01
SP9P0CG40 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.35■■□□□ 1.01
SP9P0CG40 AL162412.1-201ENST00000567129 965 ntBASIC21.35■■□□□ 1.01
SP9P0CG40 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.35■■□□□ 1.01
SP9P0CG40 LINC01023-201ENST00000606054 436 ntBASIC21.35■■□□□ 1.01
SP9P0CG40 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP9P0CG40 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.35■■□□□ 1.01
SP9P0CG40 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP9P0CG40 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP9P0CG40 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.34■■□□□ 1.01
SP9P0CG40 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SP9P0CG40 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.34■■□□□ 1.01
SP9P0CG40 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP9P0CG40 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.34■■□□□ 1.01
SP9P0CG40 RPPH1-201ENST00000516869 333 ntBASIC21.34■■□□□ 1.01
SP9P0CG40 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.34■■□□□ 1.01
SP9P0CG40 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.34■■□□□ 1.01
SP9P0CG40 AC008403.3-201ENST00000598924 454 ntBASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms