Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LINGO3P0C6S8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
LINGO3P0C6S8 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
LINGO3P0C6S8 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.58■□□□□ 0.89
LINGO3P0C6S8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
LINGO3P0C6S8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LINGO3P0C6S8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.56■□□□□ 0.88
LINGO3P0C6S8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LINGO3P0C6S8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.55■□□□□ 0.88
LINGO3P0C6S8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LINGO3P0C6S8 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms