Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.63■■□□□ 1.05
RETP07949 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RETP07949 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RETP07949 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.63■■□□□ 1.05
RETP07949 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
RETP07949 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.62■■□□□ 1.05
RETP07949 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.62■■□□□ 1.05
RETP07949 MIR4758-201ENST00000577688 71 ntBASIC21.62■■□□□ 1.05
RETP07949 MYCNOS-205ENST00000641950 531 ntBASIC21.62■■□□□ 1.05
RETP07949 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETP07949 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
RETP07949 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETP07949 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RETP07949 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.62■■□□□ 1.05
RETP07949 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
RETP07949 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RETP07949 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.61■■□□□ 1.05
RETP07949 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 RNA5SP413-201ENST00000516373 109 ntBASIC21.61■■□□□ 1.05
RETP07949 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.61■■□□□ 1.05
RETP07949 AC098934.4-201ENST00000564127 592 ntBASIC21.61■■□□□ 1.05
RETP07949 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.61■■□□□ 1.05
RETP07949 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RETP07949 AL117328.2-201ENST00000624617 1940 ntBASIC21.61■■□□□ 1.05
RETP07949 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.6■■□□□ 1.05
RETP07949 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.6■■□□□ 1.05
RETP07949 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.6■■□□□ 1.05
RETP07949 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.6■■□□□ 1.05
RETP07949 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RETP07949 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.6■■□□□ 1.05
RETP07949 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.6■■□□□ 1.05
RETP07949 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.6■■□□□ 1.05
RETP07949 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
RETP07949 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.6■■□□□ 1.05
RETP07949 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RETP07949 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RETP07949 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RETP07949 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.59■■□□□ 1.05
RETP07949 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC21.59■■□□□ 1.05
RETP07949 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.59■■□□□ 1.05
RETP07949 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RETP07949 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RETP07949 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
RETP07949 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
RETP07949 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RETP07949 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RETP07949 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.58■■□□□ 1.05
RETP07949 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.58■■□□□ 1.05
RETP07949 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
RETP07949 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC21.58■■□□□ 1.05
RETP07949 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETP07949 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.58■■□□□ 1.04
RETP07949 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RETP07949 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RETP07949 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.57■■□□□ 1.04
RETP07949 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RETP07949 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.57■■□□□ 1.04
RETP07949 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 RPS2P52-201ENST00000469610 820 ntBASIC21.57■■□□□ 1.04
RETP07949 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.57■■□□□ 1.04
RETP07949 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.57■■□□□ 1.04
RETP07949 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.57■■□□□ 1.04
RETP07949 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RETP07949 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms