Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
P04436 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.57■□□□□ 0.72
P04436 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.57■□□□□ 0.72
P04436 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.57■□□□□ 0.72
P04436 KRT18P61-201ENST00000585825 1298 ntBASIC19.57■□□□□ 0.72
P04436 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P04436 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
P04436 AP006587.3-201ENST00000525742 1516 ntBASIC19.56■□□□□ 0.72
P04436 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.56■□□□□ 0.72
P04436 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.56■□□□□ 0.72
P04436 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 AC004911.1-201ENST00000416316 871 ntBASIC19.56■□□□□ 0.72
P04436 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.56■□□□□ 0.72
P04436 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
P04436 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC19.56■□□□□ 0.72
P04436 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.56■□□□□ 0.72
P04436 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
P04436 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
P04436 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.55■□□□□ 0.72
P04436 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.55■□□□□ 0.72
P04436 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.55■□□□□ 0.72
P04436 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.55■□□□□ 0.72
P04436 AC092437.1-201ENST00000624794 1048 ntBASIC19.55■□□□□ 0.72
P04436 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.55■□□□□ 0.72
P04436 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
P04436 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
P04436 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.54■□□□□ 0.72
P04436 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.54■□□□□ 0.72
P04436 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
P04436 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.54■□□□□ 0.72
P04436 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.54■□□□□ 0.72
P04436 AC104187.1-201ENST00000607510 612 ntBASIC19.54■□□□□ 0.72
P04436 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.54■□□□□ 0.72
P04436 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
P04436 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
P04436 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
P04436 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
P04436 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P04436 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.53■□□□□ 0.72
P04436 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.53■□□□□ 0.72
P04436 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.53■□□□□ 0.72
P04436 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
P04436 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
P04436 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.53■□□□□ 0.72
P04436 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
P04436 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.53■□□□□ 0.72
P04436 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.53■□□□□ 0.72
P04436 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.52■□□□□ 0.72
P04436 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.52■□□□□ 0.72
P04436 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.52■□□□□ 0.72
P04436 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
P04436 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.52■□□□□ 0.72
P04436 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.52■□□□□ 0.72
P04436 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
P04436 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.52■□□□□ 0.72
P04436 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.52■□□□□ 0.72
P04436 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.71
P04436 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms