Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.75■■□□□ 1.55
ALDH1A1P00352 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 MIR1224-201ENST00000408193 85 ntBASIC24.74■■□□□ 1.55
ALDH1A1P00352 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC24.74■■□□□ 1.55
ALDH1A1P00352 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
ALDH1A1P00352 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
ALDH1A1P00352 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 LINC00543-201ENST00000567234 1845 ntBASIC24.73■■□□□ 1.55
ALDH1A1P00352 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 SERPINH1P1-201ENST00000419794 1249 ntBASIC24.73■■□□□ 1.55
ALDH1A1P00352 AC079089.2-201ENST00000531211 1277 ntBASIC24.73■■□□□ 1.55
ALDH1A1P00352 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC24.73■■□□□ 1.55
ALDH1A1P00352 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
ALDH1A1P00352 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
ALDH1A1P00352 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.72■■□□□ 1.55
ALDH1A1P00352 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
ALDH1A1P00352 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ALDH1A1P00352 FAM210CP-201ENST00000445714 574 ntBASIC24.72■■□□□ 1.55
ALDH1A1P00352 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ALDH1A1P00352 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
ALDH1A1P00352 AL359736.2-201ENST00000621992 437 ntBASIC24.72■■□□□ 1.55
ALDH1A1P00352 EED-207ENST00000528180 1745 ntTSL 5 BASIC24.72■■□□□ 1.55
ALDH1A1P00352 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC24.72■■□□□ 1.55
ALDH1A1P00352 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 CBFB-203ENST00000561924 584 ntTSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 AL034346.1-201ENST00000568244 1277 ntBASIC24.71■■□□□ 1.55
ALDH1A1P00352 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 MIR4497-201ENST00000583208 89 ntBASIC24.71■■□□□ 1.55
ALDH1A1P00352 AL591742.1-201ENST00000604433 565 ntBASIC24.71■■□□□ 1.55
ALDH1A1P00352 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.71■■□□□ 1.55
ALDH1A1P00352 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
ALDH1A1P00352 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.55
ALDH1A1P00352 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
ALDH1A1P00352 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
ALDH1A1P00352 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
ALDH1A1P00352 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ALDH1A1P00352 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ALDH1A1P00352 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
ALDH1A1P00352 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC24.7■■□□□ 1.54
ALDH1A1P00352 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.7■■□□□ 1.54
ALDH1A1P00352 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ALDH1A1P00352 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ALDH1A1P00352 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ALDH1A1P00352 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ALDH1A1P00352 ECEL1P3-201ENST00000427961 737 ntBASIC24.69■■□□□ 1.54
ALDH1A1P00352 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ALDH1A1P00352 AC008175.2-201ENST00000612840 297 ntBASIC24.69■■□□□ 1.54
ALDH1A1P00352 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC24.69■■□□□ 1.54
ALDH1A1P00352 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ALDH1A1P00352 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ALDH1A1P00352 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
ALDH1A1P00352 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC24.68■■□□□ 1.54
ALDH1A1P00352 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.68■■□□□ 1.54
ALDH1A1P00352 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC24.68■■□□□ 1.54
ALDH1A1P00352 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC24.68■■□□□ 1.54
ALDH1A1P00352 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.68■■□□□ 1.54
ALDH1A1P00352 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.67■■□□□ 1.54
ALDH1A1P00352 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ALDH1A1P00352 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms