Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRNP200O75643 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.58■□□□□ 0.88
SNRNP200O75643 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNRNP200O75643 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
SNRNP200O75643 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.58■□□□□ 0.88
SNRNP200O75643 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
SNRNP200O75643 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRNP200O75643 AL117328.2-201ENST00000624617 1940 ntBASIC20.57■□□□□ 0.88
SNRNP200O75643 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNRNP200O75643 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNRNP200O75643 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNRNP200O75643 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.57■□□□□ 0.88
SNRNP200O75643 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.57■□□□□ 0.88
SNRNP200O75643 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNRNP200O75643 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.57■□□□□ 0.88
SNRNP200O75643 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.57■□□□□ 0.88
SNRNP200O75643 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
SNRNP200O75643 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.56■□□□□ 0.88
SNRNP200O75643 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
SNRNP200O75643 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
SNRNP200O75643 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 AC010542.4-201ENST00000563151 1910 ntBASIC20.56■□□□□ 0.88
SNRNP200O75643 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNRNP200O75643 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.56■□□□□ 0.88
SNRNP200O75643 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRNP200O75643 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRNP200O75643 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.56■□□□□ 0.88
SNRNP200O75643 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRNP200O75643 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.55■□□□□ 0.88
SNRNP200O75643 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNRNP200O75643 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRNP200O75643 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNRNP200O75643 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNRNP200O75643 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.55■□□□□ 0.88
SNRNP200O75643 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNRNP200O75643 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.54■□□□□ 0.88
SNRNP200O75643 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.54■□□□□ 0.88
SNRNP200O75643 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.54■□□□□ 0.88
SNRNP200O75643 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.54■□□□□ 0.88
SNRNP200O75643 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.54■□□□□ 0.88
SNRNP200O75643 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.54■□□□□ 0.88
SNRNP200O75643 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SNRNP200O75643 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNRNP200O75643 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNRNP200O75643 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.54■□□□□ 0.88
SNRNP200O75643 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SNRNP200O75643 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.54■□□□□ 0.88
SNRNP200O75643 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.54■□□□□ 0.88
SNRNP200O75643 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
SNRNP200O75643 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNRNP200O75643 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
SNRNP200O75643 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.53■□□□□ 0.88
SNRNP200O75643 AC022517.1-201ENST00000592429 346 ntBASIC20.53■□□□□ 0.88
SNRNP200O75643 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.53■□□□□ 0.88
SNRNP200O75643 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SNRNP200O75643 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.53■□□□□ 0.88
SNRNP200O75643 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNRNP200O75643 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRNP200O75643 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRNP200O75643 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRNP200O75643 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNRNP200O75643 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.52■□□□□ 0.88
SNRNP200O75643 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRNP200O75643 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRNP200O75643 KRT19P1-201ENST00000405746 1186 ntBASIC20.52■□□□□ 0.88
SNRNP200O75643 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.52■□□□□ 0.88
SNRNP200O75643 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.52■□□□□ 0.88
SNRNP200O75643 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.52■□□□□ 0.88
SNRNP200O75643 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.52■□□□□ 0.88
SNRNP200O75643 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNRNP200O75643 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.52■□□□□ 0.88
SNRNP200O75643 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms