Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.64■□□□□ 0.89
CNOT3O75175 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.64■□□□□ 0.89
CNOT3O75175 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
CNOT3O75175 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CNOT3O75175 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
CNOT3O75175 AC092068.2-201ENST00000590491 1708 ntBASIC20.64■□□□□ 0.89
CNOT3O75175 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT3O75175 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT3O75175 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT3O75175 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.63■□□□□ 0.89
CNOT3O75175 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.63■□□□□ 0.89
CNOT3O75175 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.63■□□□□ 0.89
CNOT3O75175 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.63■□□□□ 0.89
CNOT3O75175 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CNOT3O75175 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CNOT3O75175 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CNOT3O75175 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CNOT3O75175 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT3O75175 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.62■□□□□ 0.89
CNOT3O75175 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT3O75175 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.62■□□□□ 0.89
CNOT3O75175 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.62■□□□□ 0.89
CNOT3O75175 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
CNOT3O75175 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.62■□□□□ 0.89
CNOT3O75175 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CNOT3O75175 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.61■□□□□ 0.89
CNOT3O75175 ECEL1P1-201ENST00000373592 1742 ntBASIC20.61■□□□□ 0.89
CNOT3O75175 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT3O75175 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CNOT3O75175 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.61■□□□□ 0.89
CNOT3O75175 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.61■□□□□ 0.89
CNOT3O75175 TERF1P2-201ENST00000583350 1212 ntBASIC20.61■□□□□ 0.89
CNOT3O75175 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.61■□□□□ 0.89
CNOT3O75175 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.61■□□□□ 0.89
CNOT3O75175 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CNOT3O75175 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.6■□□□□ 0.89
CNOT3O75175 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.6■□□□□ 0.89
CNOT3O75175 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT3O75175 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT3O75175 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.6■□□□□ 0.89
CNOT3O75175 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CNOT3O75175 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CNOT3O75175 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CNOT3O75175 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CNOT3O75175 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CNOT3O75175 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT3O75175 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT3O75175 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.59■□□□□ 0.89
CNOT3O75175 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.59■□□□□ 0.89
CNOT3O75175 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.59■□□□□ 0.89
CNOT3O75175 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.59■□□□□ 0.89
CNOT3O75175 KRT18P14-201ENST00000534205 1250 ntBASIC20.59■□□□□ 0.89
CNOT3O75175 IKBKGP1-201ENST00000612193 1073 ntBASIC20.59■□□□□ 0.89
CNOT3O75175 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT3O75175 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT3O75175 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CNOT3O75175 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms