Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.2■□□□□ 0.66
PFDN1O60925 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PFDN1O60925 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 LINC00273-201ENST00000539813 1452 ntBASIC19.2■□□□□ 0.66
PFDN1O60925 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PFDN1O60925 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PFDN1O60925 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.2■□□□□ 0.66
PFDN1O60925 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.2■□□□□ 0.66
PFDN1O60925 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PFDN1O60925 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PFDN1O60925 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PFDN1O60925 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.19■□□□□ 0.66
PFDN1O60925 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PFDN1O60925 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.19■□□□□ 0.66
PFDN1O60925 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 AC004408.2-201ENST00000623613 2777 ntBASIC19.19■□□□□ 0.66
PFDN1O60925 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PFDN1O60925 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PFDN1O60925 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.18■□□□□ 0.66
PFDN1O60925 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PFDN1O60925 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PFDN1O60925 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PFDN1O60925 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.17■□□□□ 0.66
PFDN1O60925 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.17■□□□□ 0.66
PFDN1O60925 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.17■□□□□ 0.66
PFDN1O60925 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PFDN1O60925 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.16■□□□□ 0.66
PFDN1O60925 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PFDN1O60925 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.16■□□□□ 0.66
PFDN1O60925 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PFDN1O60925 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.16■□□□□ 0.66
PFDN1O60925 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PFDN1O60925 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PFDN1O60925 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PFDN1O60925 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PFDN1O60925 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
PFDN1O60925 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.15■□□□□ 0.66
PFDN1O60925 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PFDN1O60925 AP002365.1-201ENST00000603448 772 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms