Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM13O60858 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRIM13O60858 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM13O60858 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM13O60858 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRIM13O60858 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM13O60858 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TRIM13O60858 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.04■□□□□ 0.96
TRIM13O60858 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM13O60858 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRIM13O60858 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM13O60858 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM13O60858 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM13O60858 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TRIM13O60858 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM13O60858 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TRIM13O60858 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM13O60858 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TRIM13O60858 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM13O60858 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.03■□□□□ 0.96
TRIM13O60858 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
TRIM13O60858 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM13O60858 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM13O60858 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM13O60858 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM13O60858 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 AK3-203ENST00000447596 705 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM13O60858 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM13O60858 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM13O60858 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM13O60858 AC099791.2-201ENST00000605725 427 ntBASIC21.02■□□□□ 0.96
TRIM13O60858 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM13O60858 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM13O60858 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM13O60858 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM13O60858 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM13O60858 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
TRIM13O60858 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM13O60858 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
TRIM13O60858 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.01■□□□□ 0.95
TRIM13O60858 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM13O60858 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 AC073130.3-201ENST00000624389 2278 ntBASIC21.01■□□□□ 0.95
TRIM13O60858 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM13O60858 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM13O60858 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21■□□□□ 0.95
TRIM13O60858 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21■□□□□ 0.95
TRIM13O60858 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
TRIM13O60858 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21■□□□□ 0.95
TRIM13O60858 AC087239.1-201ENST00000622671 572 ntBASIC21■□□□□ 0.95
TRIM13O60858 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM13O60858 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM13O60858 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM13O60858 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TRIM13O60858 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM13O60858 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.99■□□□□ 0.95
TRIM13O60858 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.99■□□□□ 0.95
TRIM13O60858 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
TRIM13O60858 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 OR2I1P-207ENST00000453522 948 ntBASIC20.99■□□□□ 0.95
TRIM13O60858 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.99■□□□□ 0.95
TRIM13O60858 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TRIM13O60858 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
TRIM13O60858 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM13O60858 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM13O60858 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.98■□□□□ 0.95
TRIM13O60858 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.98■□□□□ 0.95
TRIM13O60858 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TRIM13O60858 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms