Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
RTL8CO15255 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL8CO15255 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL8CO15255 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL8CO15255 AC068338.2-201ENST00000563278 1430 ntBASIC14.3□□□□□ -0.12
RTL8CO15255 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RTL8CO15255 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
RTL8CO15255 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL8CO15255 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RTL8CO15255 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
RTL8CO15255 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL8CO15255 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC14.29□□□□□ -0.12
RTL8CO15255 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 AC098590.1-201ENST00000468126 897 ntBASIC14.29□□□□□ -0.12
RTL8CO15255 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTL8CO15255 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RTL8CO15255 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RTL8CO15255 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC14.29□□□□□ -0.12
RTL8CO15255 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.29□□□□□ -0.12
RTL8CO15255 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.28□□□□□ -0.12
RTL8CO15255 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RTL8CO15255 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.28□□□□□ -0.12
RTL8CO15255 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 RARRES2P4-201ENST00000514074 484 ntBASIC14.28□□□□□ -0.12
RTL8CO15255 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.28□□□□□ -0.12
RTL8CO15255 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RTL8CO15255 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RTL8CO15255 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RTL8CO15255 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC14.27□□□□□ -0.12
RTL8CO15255 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RTL8CO15255 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC14.27□□□□□ -0.13
RTL8CO15255 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RTL8CO15255 DUSP5P2-201ENST00000426873 1033 ntBASIC14.27□□□□□ -0.13
RTL8CO15255 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.27□□□□□ -0.13
RTL8CO15255 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 AC092118.2-201ENST00000613495 667 ntBASIC14.27□□□□□ -0.13
RTL8CO15255 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.27□□□□□ -0.13
RTL8CO15255 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RTL8CO15255 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RTL8CO15255 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.26□□□□□ -0.13
RTL8CO15255 FXN-202ENST00000396364 980 ntTSL 5 BASIC14.26□□□□□ -0.13
RTL8CO15255 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 AC093787.1-201ENST00000450396 207 ntBASIC14.26□□□□□ -0.13
RTL8CO15255 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.26□□□□□ -0.13
RTL8CO15255 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
RTL8CO15255 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.26□□□□□ -0.13
RTL8CO15255 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.26□□□□□ -0.13
RTL8CO15255 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RTL8CO15255 OR10C1-204ENST00000622521 1039 ntBASIC14.26□□□□□ -0.13
RTL8CO15255 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RTL8CO15255 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
RTL8CO15255 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
RTL8CO15255 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms