Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 CA15P2-201ENST00000611168 834 ntBASIC20.32■□□□□ 0.84
CASQ2O14958 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
CASQ2O14958 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASQ2O14958 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.31■□□□□ 0.84
CASQ2O14958 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.31■□□□□ 0.84
CASQ2O14958 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CASQ2O14958 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASQ2O14958 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASQ2O14958 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.31■□□□□ 0.84
CASQ2O14958 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CASQ2O14958 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASQ2O14958 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
CASQ2O14958 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
CASQ2O14958 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
CASQ2O14958 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CASQ2O14958 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.3■□□□□ 0.84
CASQ2O14958 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CASQ2O14958 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.29■□□□□ 0.84
CASQ2O14958 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.29■□□□□ 0.84
CASQ2O14958 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CASQ2O14958 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.29■□□□□ 0.84
CASQ2O14958 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 HES4-204ENST00000484667 667 ntTSL 3 BASIC20.29■□□□□ 0.84
CASQ2O14958 AC087393.1-201ENST00000582896 145 ntBASIC20.29■□□□□ 0.84
CASQ2O14958 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CASQ2O14958 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CASQ2O14958 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.28■□□□□ 0.84
CASQ2O14958 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.28■□□□□ 0.84
CASQ2O14958 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.28■□□□□ 0.84
CASQ2O14958 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
CASQ2O14958 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CASQ2O14958 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CASQ2O14958 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.27■□□□□ 0.84
CASQ2O14958 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.27■□□□□ 0.84
CASQ2O14958 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.27■□□□□ 0.84
CASQ2O14958 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.27■□□□□ 0.84
CASQ2O14958 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CASQ2O14958 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CASQ2O14958 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.27■□□□□ 0.84
CASQ2O14958 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
CASQ2O14958 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CASQ2O14958 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CASQ2O14958 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CASQ2O14958 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CASQ2O14958 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.26■□□□□ 0.83
CASQ2O14958 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms