Protein–RNA interactions for Protein: C9JBD0

KRBOX1, KRAB domain-containing protein 1, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRBOX1C9JBD0 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 AC138932.1-201ENST00000534164 6830 ntBASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KRBOX1C9JBD0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KRBOX1C9JBD0 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KRBOX1C9JBD0 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KRBOX1C9JBD0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
KRBOX1C9JBD0 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KRBOX1C9JBD0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 RPS2P35-201ENST00000443417 897 ntBASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 AC005082.1-201ENST00000413042 2259 ntBASIC17.37■□□□□ 0.37
KRBOX1C9JBD0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms