Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TCRBV3S1A0A5B6 AP005212.1-201ENST00000581547 1997 ntBASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 BHLHE23-202ENST00000612929 1109 ntBASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
TCRBV3S1A0A5B6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TCRBV3S1A0A5B6 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 AL031602.1-201ENST00000633169 911 ntBASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 AC009102.2-201ENST00000606772 1639 ntBASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TCRBV3S1A0A5B6 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 RNF165-205ENST00000588679 2904 ntBASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TCRBV3S1A0A5B6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 AL499627.2-201ENST00000606283 725 ntBASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.02■□□□□ 0.8
TCRBV3S1A0A5B6 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV3S1A0A5B6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
TCRBV3S1A0A5B6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TCRBV3S1A0A5B6 OR7E47P-201ENST00000546390 1422 ntBASIC20.02■□□□□ 0.79
TCRBV3S1A0A5B6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TCRBV3S1A0A5B6 AC137630.3-201ENST00000607245 391 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms