Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV8-6A0A0B4J262 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 TRIR-205ENST00000592273 783 ntTSL 3 BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 AC092053.2-201ENST00000640557 1818 ntBASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 AC005703.6-201ENST00000623265 1329 ntBASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV8-6A0A0B4J262 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 AC010997.5-201ENST00000609182 354 ntBASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV8-6A0A0B4J262 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 OR2A1-AS1-204ENST00000470435 602 ntBASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRAV8-6A0A0B4J262 AL157384.1-201ENST00000445995 2473 ntBASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV8-6A0A0B4J262 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.62■□□□□ 0.09
TRAV8-6A0A0B4J262 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-6A0A0B4J262 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV8-6A0A0B4J262 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms