Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 AC005229.4-201ENST00000610085 2198 ntBASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 C17orf82-201ENST00000623772 1530 ntBASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 DUX4L19-201ENST00000557448 1267 ntBASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 AC144652.1-201ENST00000609974 1624 ntBASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV8-3A0A0A6YYJ7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC087742.1-201ENST00000575880 1738 ntBASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRAV8-3A0A0A6YYJ7 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 AL136116.3-201ENST00000402907 1138 ntBASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC131281.2-201ENST00000520478 145 ntBASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 AC010542.4-201ENST00000563151 1910 ntBASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC15.07■□□□□ 0
TRAV8-3A0A0A6YYJ7 LINC01529-204ENST00000636474 1715 ntBASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 AL512631.2-201ENST00000604634 923 ntBASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV8-3A0A0A6YYJ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms