Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRAV30A0A087WSZ9 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRAV30A0A087WSZ9 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 SYT6-210ENST00000641643 1587 ntBASIC16.77■□□□□ 0.27
TRAV30A0A087WSZ9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 RPP21-222ENST00000433076 577 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 AL034346.1-201ENST00000568244 1277 ntBASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 AC104564.3-201ENST00000582367 638 ntBASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV30A0A087WSZ9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 AL356441.2-201ENST00000443009 864 ntBASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 AL512631.2-201ENST00000604634 923 ntBASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 RASSF1-AS1-201ENST00000629828 790 ntBASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV30A0A087WSZ9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 SF1-220ENST00000626028 704 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 OXCT2P1-201ENST00000447263 1535 ntBASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV30A0A087WSZ9 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV30A0A087WSZ9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms