Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 KLF7-209ENST00000458272 539 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 RN7SL225P-201ENST00000464648 298 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 AC011362.1-201ENST00000507050 485 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 DHDDS-216ENST00000525682 1235 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC12.22□□□□□ -0.45
SLC1A1P43005 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.22□□□□□ -0.45
SLC1A1P43005 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 IGHV1OR16-2-201ENST00000564937 349 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 AC140658.2-201ENST00000566360 348 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 LINC01828-205ENST00000594329 863 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AL627230.2-201ENST00000613254 655 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AL358215.3-201ENST00000640695 1186 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 LINC01588-203ENST00000529902 4279 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 APBA2-204ENST00000558259 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 CTCFL-217ENST00000608425 2915 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 RHOXF2B-201ENST00000371402 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
SLC1A1P43005 PPFIA2-227ENST00000552948 3976 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 ZNF625-203ENST00000455799 1678 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 EIF3LP1-201ENST00000554099 1658 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 OPRM1-209ENST00000435918 2217 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 ATAD3C-201ENST00000378785 3859 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 SEC14L1P1-201ENST00000534767 2181 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 OLFML2B-203ENST00000367940 2685 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 LY6G5B-207ENST00000375864 2654 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 LINC00974-201ENST00000456403 2141 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 ZNF781-203ENST00000590008 2148 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 INPP5B-203ENST00000373024 3060 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 YIPF1-202ENST00000371399 1503 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 POTEE-205ENST00000626191 2027 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 ENOX2-203ENST00000370935 3963 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 PTPN20-204ENST00000374346 2481 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 C11orf54-214ENST00000540113 2442 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 TXNRD1-206ENST00000524698 1933 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC12.21□□□□□ -0.45
SLC1A1P43005 TMEM159-202ENST00000261388 1812 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 IQANK1-203ENST00000533004 2737 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 MIR9-3HG-203ENST00000546186 2718 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 POGLUT1-201ENST00000295588 3533 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC241952.1-201ENST00000612480 6897 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 SNCA-202ENST00000345009 1096 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 SYCP3-203ENST00000392927 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 EMP1-202ENST00000396301 675 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC068298.1-201ENST00000465165 161 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 RN7SL743P-201ENST00000475032 298 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 EHMT1-210ENST00000478940 591 ntTSL 4 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC015743.1-201ENST00000524123 795 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 GABARAP-203ENST00000571129 568 ntTSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC091691.1-201ENST00000583587 1018 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC104521.1-201ENST00000598582 279 ntTSL 5 BASIC12.21□□□□□ -0.45
SLC1A1P43005 RNF146-211ENST00000609447 607 ntTSL 4 BASIC12.21□□□□□ -0.45
SLC1A1P43005 AC148476.1-201ENST00000622182 705 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 CU634019.5-201ENST00000623518 924 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 AC073488.4-201ENST00000632688 757 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 CGREF1-209ENST00000640154 336 ntTSL 5 BASIC12.21□□□□□ -0.45
SLC1A1P43005 VWFP1-201ENST00000457911 2907 ntBASIC12.21□□□□□ -0.45
SLC1A1P43005 CAPN9-202ENST00000354537 2484 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
SLC1A1P43005 EPB41L2-203ENST00000368128 4456 ntAPPRIS P3 TSL 5 BASIC12.21□□□□□ -0.46
SLC1A1P43005 TDG-201ENST00000266775 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SLC1A1P43005 OR4D2-202ENST00000641866 2011 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
SLC1A1P43005 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
SLC1A1P43005 PPARD-205ENST00000448077 3516 ntTSL 2 BASIC12.21□□□□□ -0.46
SLC1A1P43005 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
SLC1A1P43005 PPARD-204ENST00000418635 3453 ntTSL 2 BASIC12.21□□□□□ -0.46
SLC1A1P43005 ZMYND11-201ENST00000309776 4228 ntTSL 2 BASIC12.21□□□□□ -0.46
SLC1A1P43005 WDR47-202ENST00000361054 4115 ntTSL 5 BASIC12.21□□□□□ -0.46
SLC1A1P43005 COG1-210ENST00000618996 3369 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
SLC1A1P43005 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
SLC1A1P43005 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 CCDC149-202ENST00000389609 2127 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 CTAGE16P-201ENST00000435601 2412 ntBASIC12.2□□□□□ -0.46
SLC1A1P43005 DYDC2-203ENST00000372198 1736 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 INTS14-202ENST00000420799 1741 ntTSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
SLC1A1P43005 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SLC1A1P43005 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 276 ms