Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 BTF3L4-201ENST00000313334 4703 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 TRAPPC9-202ENST00000438773 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 LRIT2-201ENST00000372113 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 CTTNBP2-201ENST00000160373 5970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 ZNF142-201ENST00000411696 5926 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 CIZ1-201ENST00000277465 2742 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 TXNL4B-201ENST00000268483 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
SLC1A1P43005 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
SLC1A1P43005 KPRP-201ENST00000606109 2492 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
SLC1A1P43005 SIRPB1-202ENST00000279477 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 TGFA-201ENST00000295400 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC091078.1-202ENST00000543286 2012 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AL356273.3-201ENST00000623474 1989 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 AC007365.3-202ENST00000417695 1722 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC008575.2-202ENST00000506997 1643 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 KNOP1P4-201ENST00000445020 1438 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 HNRNPR-201ENST00000302271 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 NT5E-203ENST00000369651 3918 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 TAGLN2-201ENST00000320307 709 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 THYN1-202ENST00000352327 835 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 ITLN2-201ENST00000368029 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 LYZL2-201ENST00000375318 818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 SUSD3-201ENST00000375469 1114 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
SLC1A1P43005 APOL4-204ENST00000397275 845 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 MED15P3-201ENST00000413613 326 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 GPAT2P2-201ENST00000445404 863 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 AL450346.2-201ENST00000495602 1024 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC116553.1-201ENST00000561752 397 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
SLC1A1P43005 TARDBP-217ENST00000616545 920 ntTSL 5 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC011462.4-201ENST00000616866 449 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 TARDBP-226ENST00000621790 1008 ntTSL 5 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC080080.2-201ENST00000624307 590 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 FP236383.2-201ENST00000625598 923 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 FP236383.3-201ENST00000627981 923 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 FP671120.3-201ENST00000631211 923 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 AC093323.3-201ENST00000632627 949 ntBASIC12.23□□□□□ -0.45
SLC1A1P43005 TARDBP-229ENST00000638264 774 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 DLGAP4-213ENST00000489701 2396 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 ADCY4-204ENST00000554068 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 GRID1-AS1-203ENST00000630182 2100 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 IL7-201ENST00000263851 2076 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 CENPP-201ENST00000375576 3088 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC139100.1-201ENST00000588950 2035 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 PLSCR4-202ENST00000383083 3033 ntTSL 5 BASIC12.23□□□□□ -0.45
SLC1A1P43005 AC067863.2-201ENST00000559120 1980 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 LINC02288-201ENST00000500215 2924 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 NOXRED1-201ENST00000380835 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
SLC1A1P43005 MYO15A-203ENST00000418233 3411 ntTSL 2 BASIC12.23□□□□□ -0.45
SLC1A1P43005 C3orf20-201ENST00000253697 3326 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 RRBP1-210ENST00000610403 3309 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AC011466.4-201ENST00000623064 1614 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 DMC1-201ENST00000216024 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 FCRL3-201ENST00000368184 4725 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 DCANP1-201ENST00000503143 3135 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SLC1A1P43005 KBTBD4-209ENST00000533290 3079 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 DNAJC2-204ENST00000412522 3033 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 ZNF141-201ENST00000240499 2970 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 KRT8P27-201ENST00000447301 1457 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 HPS1-204ENST00000361490 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 STAG3L4-202ENST00000416602 2143 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 SLC18A1-204ENST00000437980 2822 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 LINC00319-202ENST00000448049 3507 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 L3MBTL3-207ENST00000529410 4518 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AL451165.1-201ENST00000334441 328 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 GMNN-202ENST00000356509 1133 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 HDAC8-201ENST00000373554 833 ntTSL 2 BASIC12.22□□□□□ -0.45
SLC1A1P43005 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
SLC1A1P43005 MBL3P-201ENST00000402234 644 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 CYTH4-202ENST00000402997 633 ntTSL 4 BASIC12.22□□□□□ -0.45
SLC1A1P43005 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC12.22□□□□□ -0.45
SLC1A1P43005 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
SLC1A1P43005 AL627313.1-201ENST00000428860 238 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AC005730.1-201ENST00000434406 344 ntBASIC12.22□□□□□ -0.45
SLC1A1P43005 IDI2-AS1-203ENST00000434470 435 ntTSL 3 BASIC12.22□□□□□ -0.45
SLC1A1P43005 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 530 ms