Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC12.31□□□□□ -0.44
MTHFRP42898 PPY-205ENST00000591228 499 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC006027.1-201ENST00000608195 741 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 TP73-206ENST00000378288 5120 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 CYP1B1-204ENST00000494864 1479 ntTSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 STAU2-202ENST00000517542 1695 ntTSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 AC139099.1-202ENST00000574098 2409 ntBASIC12.31□□□□□ -0.44
MTHFRP42898 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC12.31□□□□□ -0.44
MTHFRP42898 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 AC012377.1-201ENST00000499797 2730 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
MTHFRP42898 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
MTHFRP42898 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 SERPINH1-202ENST00000524558 3391 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 DCK-204ENST00000504952 2614 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 NKAPL-201ENST00000343684 1639 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MTHFRP42898 AP001189.1-201ENST00000447519 1426 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 CCNB3P1-201ENST00000504855 1431 ntBASIC12.3□□□□□ -0.44
MTHFRP42898 POLR3E-219ENST00000615879 3655 ntTSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 CRX-202ENST00000539067 2275 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 FMO3-201ENST00000367755 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 LIAS-202ENST00000340169 1485 ntTSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 CLDN17-201ENST00000286808 1193 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MTHFRP42898 ELOVL5-202ENST00000370913 580 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 PAEP-202ENST00000371766 851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 SCGB2B2-201ENST00000379204 426 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 TRAV3-201ENST00000390425 519 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MTHFRP42898 CATIP-AS2-201ENST00000411433 535 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 PROCA1-204ENST00000439862 1137 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 LAMTOR5-AS1-202ENST00000457535 817 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 AL606534.5-201ENST00000517560 1243 ntBASIC12.3□□□□□ -0.44
MTHFRP42898 CYB5RL-209ENST00000534324 1148 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 AC136475.5-201ENST00000534483 827 ntTSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 AC020978.3-202ENST00000563175 457 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 COX10-AS1-203ENST00000577798 936 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 AC025211.1-201ENST00000582272 373 ntTSL 3 BASIC12.3□□□□□ -0.44
MTHFRP42898 AP000894.1-201ENST00000584430 520 ntBASIC12.3□□□□□ -0.44
MTHFRP42898 AC067969.1-201ENST00000595853 552 ntTSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 Metazoa_SRP.154-201ENST00000615469 268 ntBASIC12.3□□□□□ -0.44
MTHFRP42898 KLLN-201ENST00000445946 4277 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
MTHFRP42898 ALDH8A1-201ENST00000265605 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 ERBB2-203ENST00000445658 3238 ntTSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.3□□□□□ -0.44
MTHFRP42898 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 C1S-221ENST00000617865 2844 ntTSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
MTHFRP42898 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
MTHFRP42898 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
MTHFRP42898 FAM47DP-201ENST00000402340 3290 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 PLEKHG4-204ENST00000427155 4455 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 SNX12-207ENST00000622277 2422 ntAPPRIS P3 TSL 4 BASIC12.29□□□□□ -0.44
MTHFRP42898 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 AL357140.3-201ENST00000639753 1983 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 RPS6KB1-202ENST00000393021 5479 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 PCDHB15-201ENST00000231173 4017 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
MTHFRP42898 DSCR3-201ENST00000309117 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 AC092902.5-201ENST00000641650 3256 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 LRRC37A7P-201ENST00000583900 2759 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 PRPS2-202ENST00000380668 2511 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 NT5DC2-201ENST00000307076 2047 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 CDKL1-203ENST00000395834 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 GALK2-212ENST00000559454 1768 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 EBNA1BP2-202ENST00000431635 1503 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 KRTAP4-8-202ENST00000333822 1161 ntAPPRIS P2 BASIC12.29□□□□□ -0.44
MTHFRP42898 RNA5SP358-201ENST00000362973 117 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 AP000346.1-201ENST00000390329 1087 ntTSL 5 BASIC12.29□□□□□ -0.44
MTHFRP42898 AC246787.1-201ENST00000392301 627 ntBASIC12.29□□□□□ -0.44
MTHFRP42898 AC019294.1-201ENST00000395215 1184 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 CNIH1-202ENST00000395573 1233 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
MTHFRP42898 AC092431.1-201ENST00000415342 420 ntTSL 3 BASIC12.29□□□□□ -0.44
MTHFRP42898 AC016747.1-203ENST00000422740 595 ntTSL 2 BASIC12.29□□□□□ -0.44
MTHFRP42898 RPS21-204ENST00000450116 418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms