Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04436 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC10.76□□□□□ -0.69
P04436 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04436 AC106872.1-201ENST00000512492 1360 ntBASIC10.76□□□□□ -0.69
P04436 DDX4-212ENST00000514278 2451 ntTSL 5 BASIC10.76□□□□□ -0.69
P04436 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
P04436 PALM2-204ENST00000483909 1418 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 SGSM1-202ENST00000400359 4317 ntAPPRIS P4 TSL 5 BASIC10.75□□□□□ -0.69
P04436 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 RCBTB2-202ENST00000430805 3179 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
P04436 AC139100.1-201ENST00000588950 2035 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 NCAM1-229ENST00000621518 4922 ntTSL 5 BASIC10.75□□□□□ -0.69
P04436 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 OTOG-201ENST00000342528 4992 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 Z97192.3-201ENST00000420902 2975 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 SLC39A14-203ENST00000359741 4641 ntAPPRIS P3 TSL 2 BASIC10.75□□□□□ -0.69
P04436 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 TCN2-205ENST00000450638 2159 ntAPPRIS ALT2 TSL 3 BASIC10.75□□□□□ -0.69
P04436 GBAP1-201ENST00000368374 1873 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 ZNF16-202ENST00000394909 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 DHPS-202ENST00000351660 1090 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 RN7SKP9-201ENST00000364923 299 ntBASIC10.75□□□□□ -0.69
P04436 RIPPLY2-201ENST00000369687 521 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
P04436 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 PARK7-202ENST00000377488 783 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
P04436 RN7SKP73-201ENST00000411075 292 ntBASIC10.75□□□□□ -0.69
P04436 AC087163.1-201ENST00000430089 381 ntBASIC10.75□□□□□ -0.69
P04436 BX842568.1-201ENST00000435382 551 ntBASIC10.75□□□□□ -0.69
P04436 COX7CP1-201ENST00000446556 192 ntBASIC10.75□□□□□ -0.69
P04436 SERBP1P4-201ENST00000446711 1162 ntBASIC10.75□□□□□ -0.69
P04436 AC053503.3-201ENST00000448375 114 ntBASIC10.75□□□□□ -0.69
P04436 SLED1-201ENST00000506741 751 ntBASIC10.75□□□□□ -0.69
P04436 ZEB2P1-201ENST00000515048 1141 ntBASIC10.75□□□□□ -0.69
P04436 AC011676.4-201ENST00000523604 413 ntTSL 3 BASIC10.75□□□□□ -0.69
P04436 OR7E126P-201ENST00000526217 888 ntBASIC10.75□□□□□ -0.69
P04436 ENPP7P12-201ENST00000526818 631 ntBASIC10.75□□□□□ -0.69
P04436 ENPP7P6-201ENST00000529817 929 ntBASIC10.75□□□□□ -0.69
P04436 AL359220.1-201ENST00000554086 781 ntTSL 3 BASIC10.75□□□□□ -0.69
P04436 AC064799.2-201ENST00000562681 698 ntTSL 3 BASIC10.75□□□□□ -0.69
P04436 CISTR-201ENST00000570015 581 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 AC127496.2-201ENST00000576859 368 ntTSL 3 BASIC10.75□□□□□ -0.69
P04436 CISTR-202ENST00000626733 464 ntTSL 3 BASIC10.75□□□□□ -0.69
P04436 ABHD11-AS1-202ENST00000641969 358 ntBASIC10.75□□□□□ -0.69
P04436 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
P04436 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CACNA1C-210ENST00000399606 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CACNA1C-212ENST00000399621 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CACNA1C-215ENST00000399637 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CACNA1C-216ENST00000399638 6595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CACNA1C-221ENST00000402845 6568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 FAM13C-201ENST00000422313 1963 ntTSL 5 BASIC10.75□□□□□ -0.69
P04436 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
P04436 INTS14-202ENST00000420799 1741 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 GOSR2-219ENST00000638697 1705 ntTSL 5 BASIC10.75□□□□□ -0.69
P04436 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.75□□□□□ -0.69
P04436 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 ADAMTSL3-201ENST00000286744 7336 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 MIR124-2HG-203ENST00000521441 2840 ntTSL 2 BASIC10.75□□□□□ -0.69
P04436 LINC01149-202ENST00000430364 2141 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 SHC1-203ENST00000368449 2879 ntTSL 5 BASIC10.75□□□□□ -0.69
P04436 CDH3-202ENST00000429102 3611 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
P04436 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 KLHL3-207ENST00000506491 6566 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 SSUH2-201ENST00000317371 2561 ntAPPRIS P3 TSL 2 BASIC10.74□□□□□ -0.69
P04436 LINC00346-201ENST00000538077 6265 ntBASIC10.74□□□□□ -0.69
P04436 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 LARP4B-201ENST00000316157 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 HJURP-204ENST00000432087 3027 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
P04436 PIK3C2B-202ENST00000367187 7686 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 TTTY5-201ENST00000400581 1562 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 SEPT4-204ENST00000412945 1597 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
P04436 AP000787.1-206ENST00000543150 1567 ntTSL 5 BASIC10.74□□□□□ -0.69
P04436 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC10.74□□□□□ -0.69
P04436 NAB1-201ENST00000337386 4358 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC10.74□□□□□ -0.69
P04436 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
P04436 MFSD4A-201ENST00000367147 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 PKN2-203ENST00000370521 6121 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC10.74□□□□□ -0.69
P04436 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC10.74□□□□□ -0.69
P04436 SLC44A3-204ENST00000467909 2061 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
P04436 MAST4-203ENST00000403666 7586 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 PEBP4-201ENST00000256404 895 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
P04436 MLN-201ENST00000266003 527 ntTSL 5 BASIC10.74□□□□□ -0.69
P04436 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms