Protein–RNA interactions for Protein: Q9Y3Q8

TSC22D4, TSC22 domain family protein 4, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4Q9Y3Q8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TSC22D4Q9Y3Q8 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TSC22D4Q9Y3Q8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TSC22D4Q9Y3Q8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.91
TSC22D4Q9Y3Q8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.76■□□□□ 0.91
TSC22D4Q9Y3Q8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 AC133561.4-201ENST00000566112 224 ntBASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 AC233992.3-201ENST00000607491 485 ntBASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 AC106739.1-201ENST00000617035 715 ntBASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 OR7E47P-201ENST00000546390 1422 ntBASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.75■□□□□ 0.91
TSC22D4Q9Y3Q8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TSC22D4Q9Y3Q8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TSC22D4Q9Y3Q8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 AC096631.2-201ENST00000436136 790 ntBASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TSC22D4Q9Y3Q8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
TSC22D4Q9Y3Q8 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
TSC22D4Q9Y3Q8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms