Protein–RNA interactions for Protein: Q9Y3B2

EXOSC1, Exosome complex component CSL4, humanhuman

Known RBP Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1Q9Y3B2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 OXCT2P1-201ENST00000447263 1535 ntBASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
EXOSC1Q9Y3B2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 AC009102.2-201ENST00000606772 1639 ntBASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
EXOSC1Q9Y3B2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 AC079089.2-201ENST00000531211 1277 ntBASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
EXOSC1Q9Y3B2 C17orf82-201ENST00000623772 1530 ntBASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.15■□□□□ 0.66
EXOSC1Q9Y3B2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
EXOSC1Q9Y3B2 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.14■□□□□ 0.66
EXOSC1Q9Y3B2 AC092667.1-201ENST00000434301 2586 ntBASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
EXOSC1Q9Y3B2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 TSPY13P-201ENST00000338964 914 ntBASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 AC026471.6-201ENST00000622954 1905 ntBASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
EXOSC1Q9Y3B2 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms