Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
LIN7CQ9NUP9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 AC099791.2-201ENST00000605725 427 ntBASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LIN7CQ9NUP9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LIN7CQ9NUP9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIN7CQ9NUP9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LIN7CQ9NUP9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 AL024507.2-201ENST00000606070 2574 ntBASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
LIN7CQ9NUP9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
LIN7CQ9NUP9 SYT6-210ENST00000641643 1587 ntBASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LIN7CQ9NUP9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LIN7CQ9NUP9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms