Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 AC016769.1-201ENST00000409132 1010 ntBASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
MINDY3Q9H8M7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 AP006587.3-201ENST00000525742 1516 ntBASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
MINDY3Q9H8M7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
MINDY3Q9H8M7 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 AL034346.1-201ENST00000568244 1277 ntBASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
MINDY3Q9H8M7 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 AC080038.1-201ENST00000611274 1154 ntBASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
MINDY3Q9H8M7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.48■■□□□ 1.35
MINDY3Q9H8M7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 AC127496.7-201ENST00000625110 1798 ntBASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 RAP2CP1-201ENST00000605103 478 ntBASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.47■■□□□ 1.35
MINDY3Q9H8M7 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
MINDY3Q9H8M7 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms