Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CHRDQ9H2X0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.07
CHRDQ9H2X0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.07
CHRDQ9H2X0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 AC098590.1-201ENST00000468126 897 ntBASIC21.7■■□□□ 1.06
CHRDQ9H2X0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 RARRES2P4-201ENST00000514074 484 ntBASIC21.7■■□□□ 1.06
CHRDQ9H2X0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 AC079089.2-201ENST00000531211 1277 ntBASIC21.7■■□□□ 1.06
CHRDQ9H2X0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CHRDQ9H2X0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 AC008694.1-202ENST00000636953 945 ntBASIC21.69■■□□□ 1.06
CHRDQ9H2X0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CHRDQ9H2X0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AC093787.1-201ENST00000450396 207 ntBASIC21.68■■□□□ 1.06
CHRDQ9H2X0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AC069236.1-201ENST00000604339 616 ntBASIC21.68■■□□□ 1.06
CHRDQ9H2X0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AP006294.2-201ENST00000641667 209 ntBASIC21.68■■□□□ 1.06
CHRDQ9H2X0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 AP004607.7-201ENST00000527152 1677 ntBASIC21.68■■□□□ 1.06
CHRDQ9H2X0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
CHRDQ9H2X0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 EEF1DP3-203ENST00000566025 782 ntBASIC21.67■■□□□ 1.06
CHRDQ9H2X0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 AC016405.3-201ENST00000607710 860 ntBASIC21.67■■□□□ 1.06
CHRDQ9H2X0 AC083880.1-201ENST00000608266 535 ntBASIC21.67■■□□□ 1.06
CHRDQ9H2X0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CHRDQ9H2X0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 GCSHP5-201ENST00000443090 522 ntBASIC21.66■■□□□ 1.06
CHRDQ9H2X0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHRDQ9H2X0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHRDQ9H2X0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms