Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CDT1Q9H211 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDT1Q9H211 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.36■■□□□ 1.33
CDT1Q9H211 AC092437.1-201ENST00000624794 1048 ntBASIC23.36■■□□□ 1.33
CDT1Q9H211 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CDT1Q9H211 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.35■■□□□ 1.33
CDT1Q9H211 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDT1Q9H211 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
CDT1Q9H211 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CDT1Q9H211 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.35■■□□□ 1.33
CDT1Q9H211 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDT1Q9H211 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDT1Q9H211 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.34■■□□□ 1.33
CDT1Q9H211 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDT1Q9H211 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDT1Q9H211 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.34■■□□□ 1.33
CDT1Q9H211 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.34■■□□□ 1.33
CDT1Q9H211 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CDT1Q9H211 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.34■■□□□ 1.33
CDT1Q9H211 KRT87P-202ENST00000534226 1464 ntBASIC23.34■■□□□ 1.33
CDT1Q9H211 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDT1Q9H211 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDT1Q9H211 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDT1Q9H211 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CDT1Q9H211 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.33■■□□□ 1.33
CDT1Q9H211 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
CDT1Q9H211 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.33■■□□□ 1.33
CDT1Q9H211 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.33■■□□□ 1.33
CDT1Q9H211 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.33■■□□□ 1.33
CDT1Q9H211 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC23.33■■□□□ 1.33
CDT1Q9H211 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CDT1Q9H211 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.33■■□□□ 1.32
CDT1Q9H211 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CDT1Q9H211 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDT1Q9H211 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
CDT1Q9H211 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.33■■□□□ 1.32
CDT1Q9H211 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.32■■□□□ 1.32
CDT1Q9H211 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 ME3-201ENST00000323418 1068 ntTSL 5 BASIC23.32■■□□□ 1.32
CDT1Q9H211 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.32■■□□□ 1.32
CDT1Q9H211 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.32■■□□□ 1.32
CDT1Q9H211 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.32■■□□□ 1.32
CDT1Q9H211 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC23.32■■□□□ 1.32
CDT1Q9H211 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.32■■□□□ 1.32
CDT1Q9H211 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.32■■□□□ 1.32
CDT1Q9H211 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
CDT1Q9H211 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.31■■□□□ 1.32
CDT1Q9H211 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.31■■□□□ 1.32
CDT1Q9H211 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.31■■□□□ 1.32
CDT1Q9H211 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.31■■□□□ 1.32
CDT1Q9H211 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC23.31■■□□□ 1.32
CDT1Q9H211 AC233723.2-201ENST00000623798 2106 ntBASIC23.31■■□□□ 1.32
CDT1Q9H211 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.31■■□□□ 1.32
CDT1Q9H211 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
CDT1Q9H211 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CDT1Q9H211 AC092053.2-201ENST00000640557 1818 ntBASIC23.31■■□□□ 1.32
CDT1Q9H211 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC23.3■■□□□ 1.32
CDT1Q9H211 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.3■■□□□ 1.32
CDT1Q9H211 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.3■■□□□ 1.32
CDT1Q9H211 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.3■■□□□ 1.32
CDT1Q9H211 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.3■■□□□ 1.32
CDT1Q9H211 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.3■■□□□ 1.32
CDT1Q9H211 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CDT1Q9H211 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.29■■□□□ 1.32
CDT1Q9H211 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.29■■□□□ 1.32
CDT1Q9H211 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CDT1Q9H211 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.29■■□□□ 1.32
CDT1Q9H211 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CDT1Q9H211 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.29■■□□□ 1.32
CDT1Q9H211 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms