Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC12.62□□□□□ -0.39
CYSTM1Q9H1C7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 H19-210ENST00000439725 1929 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 AC018470.1-201ENST00000624790 3129 ntBASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 AC093503.3-201ENST00000624917 2352 ntBASIC12.61□□□□□ -0.39
CYSTM1Q9H1C7 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 AL356309.3-201ENST00000624132 1934 ntBASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 MIR6089-201ENST00000616698 64 ntBASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 AC112907.3-201ENST00000577781 2400 ntBASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC12.6□□□□□ -0.39
CYSTM1Q9H1C7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CYSTM1Q9H1C7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CYSTM1Q9H1C7 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CYSTM1Q9H1C7 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms