Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
PCDH11XQ9BZA7 AP006587.3-201ENST00000525742 1516 ntBASIC28.14■■■□□ 2.1
PCDH11XQ9BZA7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDH11XQ9BZA7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.1
PCDH11XQ9BZA7 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 AC007322.4-201ENST00000509611 723 ntBASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 TBCB-214ENST00000629269 413 ntTSL 5 BASIC28.14■■■□□ 2.09
PCDH11XQ9BZA7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 LINC00526-201ENST00000581067 1875 ntBASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 AC068338.2-201ENST00000563278 1430 ntBASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 AC053503.5-201ENST00000601508 636 ntBASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
PCDH11XQ9BZA7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 FAM201B-201ENST00000458407 597 ntBASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC28.12■■■□□ 2.09
PCDH11XQ9BZA7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 MARS-234ENST00000630571 216 ntTSL 5 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 MARS-235ENST00000630803 183 ntTSL 3 BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
PCDH11XQ9BZA7 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 MIR4758-201ENST00000577688 71 ntBASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC28.1■■■□□ 2.09
PCDH11XQ9BZA7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.09■■■□□ 2.09
PCDH11XQ9BZA7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH11XQ9BZA7 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH11XQ9BZA7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH11XQ9BZA7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC28.08■■■□□ 2.09
PCDH11XQ9BZA7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
PCDH11XQ9BZA7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC28.08■■■□□ 2.08
PCDH11XQ9BZA7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 MKRN4P-201ENST00000444706 1521 ntBASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 MIPEPP3-201ENST00000412105 444 ntBASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
PCDH11XQ9BZA7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.06■■■□□ 2.08
PCDH11XQ9BZA7 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC28.05■■■□□ 2.08
PCDH11XQ9BZA7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms