Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.19■□□□□ 0.82
NR1H4Q96RI1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 AC092296.2-201ENST00000589470 999 ntBASIC20.18■□□□□ 0.82
NR1H4Q96RI1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NR1H4Q96RI1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NR1H4Q96RI1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NR1H4Q96RI1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 ECEL1P2-201ENST00000461596 1295 ntBASIC20.15■□□□□ 0.82
NR1H4Q96RI1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 BX323043.1-201ENST00000641006 1765 ntBASIC20.15■□□□□ 0.82
NR1H4Q96RI1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NR1H4Q96RI1 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NR1H4Q96RI1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NR1H4Q96RI1 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NR1H4Q96RI1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms