Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN4Q96NZ1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 OR2I1P-207ENST00000453522 948 ntBASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN4Q96NZ1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
FOXN4Q96NZ1 AC026471.6-201ENST00000622954 1905 ntBASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 AC079089.2-201ENST00000531211 1277 ntBASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN4Q96NZ1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 SLC47A1P1-202ENST00000449666 945 ntBASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
FOXN4Q96NZ1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.15■□□□□ 0.66
FOXN4Q96NZ1 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms