Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SIPA1Q96FS4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SIPA1Q96FS4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.56■■□□□ 1.04
SIPA1Q96FS4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 AC138907.5-202ENST00000569484 235 ntBASIC21.55■■□□□ 1.04
SIPA1Q96FS4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 AL121832.2-201ENST00000610979 668 ntBASIC21.55■■□□□ 1.04
SIPA1Q96FS4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.55■■□□□ 1.04
SIPA1Q96FS4 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 AC010141.2-201ENST00000452426 721 ntBASIC21.54■■□□□ 1.04
SIPA1Q96FS4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 AC005181.1-201ENST00000604782 1256 ntBASIC21.54■■□□□ 1.04
SIPA1Q96FS4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SIPA1Q96FS4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 AC083906.2-201ENST00000511578 360 ntBASIC21.53■■□□□ 1.04
SIPA1Q96FS4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 KRT18P20-201ENST00000548986 1279 ntBASIC21.53■■□□□ 1.04
SIPA1Q96FS4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 AL050303.2-201ENST00000619798 666 ntBASIC21.53■■□□□ 1.04
SIPA1Q96FS4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SIPA1Q96FS4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SIPA1Q96FS4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
SIPA1Q96FS4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.51■■□□□ 1.03
SIPA1Q96FS4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIPA1Q96FS4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms