Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CTHRC1Q96CG8 AC009237.3-201ENST00000393279 1427 ntBASIC20■□□□□ 0.79
CTHRC1Q96CG8 GOLGA2P6-201ENST00000340929 2049 ntBASIC20■□□□□ 0.79
CTHRC1Q96CG8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
CTHRC1Q96CG8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CTHRC1Q96CG8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 AP006587.3-201ENST00000525742 1516 ntBASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CTHRC1Q96CG8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 TPRG1LP1-201ENST00000598702 760 ntBASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 AC010542.4-201ENST00000563151 1910 ntBASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CTHRC1Q96CG8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 AC055733.4-201ENST00000638462 1354 ntBASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 AC027612.3-201ENST00000413684 1047 ntBASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 AC005224.4-201ENST00000583262 1652 ntBASIC19.96■□□□□ 0.79
CTHRC1Q96CG8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 MIR935-201ENST00000401179 91 ntBASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CTHRC1Q96CG8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 MIR6084-201ENST00000622012 110 ntBASIC19.94■□□□□ 0.78
CTHRC1Q96CG8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms