Protein–RNA interactions for Protein: Q96A46

SLC25A28, Mitoferrin-2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A28Q96A46 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC25A28Q96A46 SRD5A1P1-201ENST00000442297 786 ntBASIC18.61■□□□□ 0.57
SLC25A28Q96A46 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SLC25A28Q96A46 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC25A28Q96A46 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
SLC25A28Q96A46 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC25A28Q96A46 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 AC142381.2-201ENST00000566120 298 ntBASIC18.6■□□□□ 0.57
SLC25A28Q96A46 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.6■□□□□ 0.57
SLC25A28Q96A46 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC25A28Q96A46 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 AF106564.1-201ENST00000607058 2553 ntBASIC18.59■□□□□ 0.57
SLC25A28Q96A46 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC25A28Q96A46 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC25A28Q96A46 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 C17orf82-201ENST00000623772 1530 ntBASIC18.58■□□□□ 0.56
SLC25A28Q96A46 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SLC25A28Q96A46 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 AC092667.1-201ENST00000434301 2586 ntBASIC18.57■□□□□ 0.56
SLC25A28Q96A46 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 AL499627.2-201ENST00000606283 725 ntBASIC18.57■□□□□ 0.56
SLC25A28Q96A46 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.57■□□□□ 0.56
SLC25A28Q96A46 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC25A28Q96A46 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 UNC93B3-201ENST00000308076 687 ntBASIC18.56■□□□□ 0.56
SLC25A28Q96A46 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC25A28Q96A46 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms