Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SMIM11BQ8TCY0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 AC018755.3-202ENST00000596210 929 ntBASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
SMIM11BQ8TCY0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SMIM11BQ8TCY0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SMIM11BQ8TCY0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 AC009831.1-201ENST00000580420 1582 ntBASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SMIM11BQ8TCY0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11BQ8TCY0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11BQ8TCY0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11BQ8TCY0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11BQ8TCY0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SMIM11BQ8TCY0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms