Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
ZNF439Q8NDP4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZNF439Q8NDP4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 SLC47A1P1-202ENST00000449666 945 ntBASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ZNF439Q8NDP4 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 AC138932.1-201ENST00000534164 6830 ntBASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 AC010141.3-201ENST00000456659 717 ntBASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 AC087239.1-201ENST00000622671 572 ntBASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.74■□□□□ 0.43
ZNF439Q8NDP4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 UNC93B3-201ENST00000308076 687 ntBASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ZNF439Q8NDP4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 AP005435.1-201ENST00000529293 1178 ntBASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ZNF439Q8NDP4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 MIR4767-201ENST00000582827 78 ntBASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ZNF439Q8NDP4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 AC008406.3-201ENST00000620001 1374 ntBASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
ZNF439Q8NDP4 AC024257.2-201ENST00000549699 147 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms