Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 EEF1DP3-203ENST00000566025 782 ntBASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
SMRP1Q8NCR6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.41■■□□□ 1.18
SMRP1Q8NCR6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 AC091874.3-201ENST00000512672 1195 ntBASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 AL139125.2-201ENST00000623134 1869 ntBASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SMRP1Q8NCR6 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
SMRP1Q8NCR6 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.39■■□□□ 1.18
SMRP1Q8NCR6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 AP004607.7-201ENST00000527152 1677 ntBASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.39■■□□□ 1.17
SMRP1Q8NCR6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 AC053503.5-201ENST00000601508 636 ntBASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SMRP1Q8NCR6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 UNC93B4-201ENST00000505679 747 ntBASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 AC079089.2-201ENST00000531211 1277 ntBASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SMRP1Q8NCR6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.36■■□□□ 1.17
SMRP1Q8NCR6 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SMRP1Q8NCR6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms